Explore our curated collection of training materials covering a wide range of topics in cloud computing, bioinformatics, and data science. These tutorials are designed for hands-on learning and support both beginners and advanced users.
Lesson materials are all available online, under a CC BY license, for self-directed study or for adaptation and re-use in your own training sessions.
Unix
Our Core Curriculum consists of the lessons in the table below.
| Tutorial | Versions | Slides | Description | Contributors | Estimated Time |
|---|---|---|---|---|---|
| Introduction to basic Unix commands | main, spring-school-2024 | This is the introduction to the basic shell commands. | Christian Henke, Peter Belmann, Jan Krueger, Nils Hoffmann, Sebastian Juenemann, Viktor Rudko | 2H |
Cloud computing
Tutorials focused on ...
| Tutorial | Versions | Slides | Description | Contributors | Estimated Time |
|---|---|---|---|---|---|
| BiBiGrid Hands-on | main | FIXME | Xaver Stiensmeier, Jan Krueger, Nils Hoffmann, Alexander Walende | FIXME |
Machine Learning on Cloud infrastructure
Tutorials focused on ...
| Tutorial | Versions | Slides | Description | Contributors | Estimated Time |
|---|---|---|---|---|---|
| Setting up ML project in the cloud infrastructure | main | FIXME | Dilfuza Djamalova | 2H |
PATCH Tutorials
Tutorials in this group contain learning material about the tools contained inside the pangenomics toolbox PATCH
| Tutorial | Versions | Slides | Description | Contributors | Estimated Time |
|---|---|---|---|---|---|
| PanBench | main | Introduction to using the web interface of panbench.eu | Andreas Rempel | 10m |
Basic Data Management in the de.NBI Cloud
Tutorial focused on ...
| Tutorial | Versions | Slides | Description | Contributors | Estimated Time |
|---|---|---|---|---|---|
| Basic Data Management in the de.NBI Cloud | main | Basic Data Management in the de.NBI Cloud. Intended for a cloud naive audiance. | Abhijeet Shah, Sebastian Juenemann | 8Hrs |
Metagenomics
Tutorials focused on dealing with metagenomics seqeuncing data
| Tutorial | Versions | Slides | Description | Contributors | Estimated Time |
|---|